Difference between revisions of "Hackathon 2013/DataIntegration"

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The Data Integration pitch is a combination of many pitches for how to use TaxonWorks with other databases:
 
The Data Integration pitch is a combination of many pitches for how to use TaxonWorks with other databases:
  
*GenBank Integration -- be able to pull genetic sequences from OTUs from TaxonWorks:
+
*GenBank Integration  
 +
**be able to pull genetic sequences from OTUs from TaxonWorks:
 
**Work has started to write Ruby script to pull sequence data from GenBank
 
**Work has started to write Ruby script to pull sequence data from GenBank
  
*Phylotastic Integration -- Patch into the Phylotastic architecture (once it is up and running) to add a list of species from TaxoNWorks and get a tree
+
*Phylotastic Integration  
 +
**Patch into the Phylotastic architecture (once it is up and running) to add a list of species from TaxoNWorks and get a tree
  
*NexML Parser -- be able to add a NexML file with any information of choice  
+
*NexML Parser  
 +
**be able to add a NexML file with any information of choice  
  
*Vizualization On Maps -- Specimen on google maps, shapefiles, tile srves from GBIF, map of life API
+
*Vizualization On Maps
 
+
**Specimen on google maps, shapefiles, tile srves from GBIF, map of life API
*Outgoing Links on a TW page to other resources
+

Revision as of 09:59, 4 October 2013

The Data Integration pitch is a combination of many pitches for how to use TaxonWorks with other databases:

  • GenBank Integration
    • be able to pull genetic sequences from OTUs from TaxonWorks:
    • Work has started to write Ruby script to pull sequence data from GenBank
  • Phylotastic Integration
    • Patch into the Phylotastic architecture (once it is up and running) to add a list of species from TaxoNWorks and get a tree
  • NexML Parser
    • be able to add a NexML file with any information of choice
  • Vizualization On Maps
    • Specimen on google maps, shapefiles, tile srves from GBIF, map of life API