Difference between revisions of "Hackathon 2013/Pitches"

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TW: TaxonWorks
 +
 
* Getting data out as DwC-A
 
* Getting data out as DwC-A
 
* Visualizing specimens or shapefiles
 
* Visualizing specimens or shapefiles
Line 4: Line 6:
 
* Operations on DwC-A in TW
 
* Operations on DwC-A in TW
 
* Define migration paths from mx, 3i, SpeciesFile and others
 
* Define migration paths from mx, 3i, SpeciesFile and others
 +
* Mapping SpeciesFile table structure into TW
 +
** Identify shortcomings in the Vue file and the model
 +
** David, Marilyn
 
* GenBank integration
 
* GenBank integration
 
* Phylotastic integration
 
* Phylotastic integration
Line 10: Line 15:
 
* Species biological interactions
 
* Species biological interactions
 
* Documenting other taxonomic schemas/workbenches
 
* Documenting other taxonomic schemas/workbenches
 +
** Andrea, Julie, Daisie, David
 +
** Figuring out why schemas/workbenches have succeeded/failed.
 +
** What are the parameters of the search?
 
* Use cases for TW
 
* Use cases for TW
 
* Linking between references and names
 
* Linking between references and names
 +
** Gaurav, Mike
 
* NeXML parser for Ruby
 
* NeXML parser for Ruby
 
* Export data into Excel (CSV/tab-delimited)
 
* Export data into Excel (CSV/tab-delimited)
 
* Code architecture for TW
 
* Code architecture for TW
 +
** Jim, Dima, Lisa, Matt, Rich
 
** Code quality
 
** Code quality
 
** Generic, general API
 
** Generic, general API
 
* Rules of zoological nomenclature as an ontology: Nomen ontology (OWL-based)
 
* Rules of zoological nomenclature as an ontology: Nomen ontology (OWL-based)
 +
** Dmitry
 
** Extend to ICNafp
 
** Extend to ICNafp
 
** URIs for name classes globally usable by anybody
 
** URIs for name classes globally usable by anybody
Line 24: Line 35:
 
* Simple example GUI (specimen in field -> point in collection)
 
* Simple example GUI (specimen in field -> point in collection)
 
** Make it work on a smart phone
 
** Make it work on a smart phone
*
+
* Documenting TW: Rspec, Wiki (best practices)
 +
* Mapping from gene space to taxon space
 +
* Simple Javascript plugin for "X" (specimen record, collection event, but prob not as complicated as a taxon/species page)
 +
* Command line (console) interface in a web browser (based on the Rails console)

Latest revision as of 11:55, 30 September 2013

TW: TaxonWorks

  • Getting data out as DwC-A
  • Visualizing specimens or shapefiles
  • Getting data in as DwC-A
  • Operations on DwC-A in TW
  • Define migration paths from mx, 3i, SpeciesFile and others
  • Mapping SpeciesFile table structure into TW
    • Identify shortcomings in the Vue file and the model
    • David, Marilyn
  • GenBank integration
  • Phylotastic integration
  • Outgoing links to other resources
  • Ruby ecoysystem for biodiversity: existing libraries into TW, TW code as libraries
  • Species biological interactions
  • Documenting other taxonomic schemas/workbenches
    • Andrea, Julie, Daisie, David
    • Figuring out why schemas/workbenches have succeeded/failed.
    • What are the parameters of the search?
  • Use cases for TW
  • Linking between references and names
    • Gaurav, Mike
  • NeXML parser for Ruby
  • Export data into Excel (CSV/tab-delimited)
  • Code architecture for TW
    • Jim, Dima, Lisa, Matt, Rich
    • Code quality
    • Generic, general API
  • Rules of zoological nomenclature as an ontology: Nomen ontology (OWL-based)
    • Dmitry
    • Extend to ICNafp
    • URIs for name classes globally usable by anybody
    • What does TROPICOS do?
  • Basic logon/users/projects (OAuth)
  • Simple example GUI (specimen in field -> point in collection)
    • Make it work on a smart phone
  • Documenting TW: Rspec, Wiki (best practices)
  • Mapping from gene space to taxon space
  • Simple Javascript plugin for "X" (specimen record, collection event, but prob not as complicated as a taxon/species page)
  • Command line (console) interface in a web browser (based on the Rails console)